WebOct 25, 2024 · A GPU accelerated DNA/RNA sequence alignment library that can perform global, semi-global (all types) as well as local … WebAug 1, 2024 · We present our work on hardware accelerated genomics pipelines, using either FPGAs or GPUs to accelerate execution of BWA-MEM, a widely-used algorithm …
Hardware acceleration of BWA-MEM genomic short read
WebApr 4, 2016 · Here, a GPU-accelerated implementation of BWA-MEM is proposed. The Seed Extension phase, one of the three main BWA-MEM algorithm phases that requires … WebApr 4, 2016 · A GPU-accelerated implementation of BWA-MEM is proposed, which obtains a twofold overall application-level speedup, which is the maximum theoretically … hill view baptist church hillview i\u0027ll
GPU-Accelerated BWA-MEM Genomic Mapping Algorithm Using …
WebIn this work, we accelerate BWA-MEM on the Convey HC2ex platform, consisting of an 8-core Intel Xeon based host processor connected to a co-processor with four Xilinx Virtex-6 FPGAs. No work has been reported in the literature about the acceleration of BWA-MEM. Numerous works are published on the acceleration of other read alignment algorithms. WebNov 23, 2024 · GPUs are now the main workhorse of majority of supercomputers and data centers to accelerate key applications. Clara Parabricks overview NVIDIA introduced the … WebExperienced C++/OpenGL/Vulkan/GPGPU software developer focused on computer simulations, FEA, GPGPU programming, mobile development … hill view barn butterton